8WSH
Crystal structure of SARS-Cov-2 main protease, pH=4.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-06-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.063, 102.597, 103.824 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.310 - 1.800 |
R-factor | 0.213792158415 |
Rwork | 0.213 |
R-free | 0.23645 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.815 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.310 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.098 | 0.852 |
Number of reflections | 66278 | 9447 |
<I/σ(I)> | 17.7 | |
Completeness [%] | 98.0 | |
Redundancy | 11.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1M Sodium acetate trihydrate pH4.0,10%PEG4000 |