8WQ9
Crystal structure of dihydropyrimidinase complexed with gamma-aminobutyric acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2021-08-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.975 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 88.314, 111.036, 112.941 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.740 - 1.970 |
R-factor | 0.1733 |
Rwork | 0.171 |
R-free | 0.21280 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.968 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.030 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.080 | 0.322 |
Number of reflections | 75195 | 7479 |
<I/σ(I)> | 14.8 | 4.3 |
Completeness [%] | 95.4 | 96.3 |
Redundancy | 3.4 | 3.4 |
CC(1/2) | 0.976 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 18%PEG8000, 100mM Tris-HCl pH7.0, 200mM Calcium Chloride |