8WNA
Crystal structure of GH1 beta-glucosidase Td2F2 E352Q laminaribiose complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-5A |
| Synchrotron site | Photon Factory |
| Beamline | BL-5A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-05-30 |
| Detector | DECTRIS PILATUS3 S 2M |
| Wavelength(s) | 1 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 68.410, 68.416, 95.988 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.420 - 1.160 |
| R-factor | 0.1514 |
| Rwork | 0.151 |
| R-free | 0.16398 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.907 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.420 | 1.180 |
| High resolution limit [Å] | 1.160 | 1.160 |
| Rmerge | 0.038 | 0.254 |
| Rmeas | 0.041 | 0.283 |
| Rpim | 0.016 | 0.123 |
| Number of reflections | 155824 | 7593 |
| <I/σ(I)> | 25.7 | 6 |
| Completeness [%] | 99.9 | 98.8 |
| Redundancy | 6.4 | 5 |
| CC(1/2) | 0.999 | 0.958 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 303 | CHES, K/Na tartrate, LiSO4 |
