8WL1
The crystal structure of D-mandelate dehydrogenase from Lactobacillus brevis
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-22 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9786 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 82.310, 132.000, 59.000 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 34.920 - 1.750 |
| R-factor | 0.21818 |
| Rwork | 0.216 |
| R-free | 0.25380 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.481 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | HKL-3000 |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 34.920 | 1.780 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Number of reflections | 32473 | 32473 |
| <I/σ(I)> | 29.5 | |
| Completeness [%] | 99.1 | |
| Redundancy | 13.1 | |
| CC(1/2) | 1.000 | 1.000 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | 0.3 M NaCl, 0.05M Tris pH 7.5, 30% Polyethylene glycol 335 |
