8WFO
Durio zibethinus trypsin inhibitor DzTI-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-04-23 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.500, 64.281, 128.404 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.650 - 1.550 |
R-factor | 0.1775 |
Rwork | 0.176 |
R-free | 0.20630 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.853 |
Data reduction software | XDS (Jan 10, 2022 BUILT=20220110) |
Data scaling software | Aimless (0.7.9) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.650 | 1.580 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.094 | 0.905 |
Rmeas | 0.101 | 0.978 |
Rpim | 0.038 | 0.366 |
Number of reflections | 65086 | 3207 |
<I/σ(I)> | 11.4 | 2.1 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7.3 | 7 |
CC(1/2) | 0.996 | 0.869 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 289 | 100 mM sodium acetate, 100 mM zinc acetate, 40% PEG 1,000 |