8WCG
Crystal structure of SARS-CoV-1 RBD in complex with nanobody aSR29 and aSR347
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 103.15 |
Detector technology | PIXEL |
Collection date | 2022-08-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979021 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.852, 134.679, 136.688 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.967 - 2.599 |
R-factor | 0.2346 |
Rwork | 0.232 |
R-free | 0.27930 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond angle | 0.634 |
Data reduction software | autoPROC |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((dev_2481: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 95.930 | 2.740 |
High resolution limit [Å] | 2.599 | 2.600 |
Rmerge | 0.121 | 1.191 |
Rmeas | 0.129 | |
Number of reflections | 83452 | 6390 |
<I/σ(I)> | 15.1 | |
Completeness [%] | 99.1 | 99.7 |
Redundancy | 7.7 | 7.97 |
CC(1/2) | 0.998 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 20% w/v PEG4000, 0.1 M Tris 8.0 |