8WC1
A carbohydrate binding domain of a putative pectate lyase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.957, 52.190, 71.023 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.820 - 1.300 |
R-factor | 0.1717 |
Rwork | 0.171 |
R-free | 0.18370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.897 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.060 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.061 | 0.297 |
Rmeas | 0.067 | 0.328 |
Rpim | 0.026 | 0.137 |
Total number of observations | 230563 | 10763 |
Number of reflections | 37307 | 1819 |
<I/σ(I)> | 18.1 | 5.6 |
Completeness [%] | 99.9 | |
Redundancy | 6.2 | 5.9 |
CC(1/2) | 0.998 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 28% w/v PEG MME 2000, 0.1M Bis-Tris pH6.5 |