Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8W7B

Fe-O nanocluster of form-IV in the 4-fold channel of Ureaplasma diversum ferritin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-29
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.55
Spacegroup nameF 4 3 2
Unit cell lengths179.802, 179.802, 179.802
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.951 - 2.700
R-factor0.189
Rwork0.183
R-free0.24550
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.906
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.15.2_3472: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.750
High resolution limit [Å]2.7007.3202.700
Rmerge0.2910.0821.644
Rmeas0.2930.0831.656
Rpim0.0340.0110.190
Number of reflections12948445357
<I/σ(I)>1.9
Completeness [%]100.0100100
Redundancy71.456.374.5
CC(1/2)0.9870.9990.960
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP297Bicine, MgCl2

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon