8W6Y
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 10 min
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-08-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.55 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 180.513, 180.513, 180.513 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.910 - 2.502 |
R-factor | 0.2019 |
Rwork | 0.197 |
R-free | 0.24730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.903 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.257 | 0.076 | 2.062 |
Rmeas | 0.259 | 0.077 | 2.081 |
Rpim | 0.031 | 0.010 | 0.283 |
Number of reflections | 16425 | 551 | 441 |
<I/σ(I)> | 2.2 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 68.7 | 57.2 | 53.3 |
CC(1/2) | 0.997 | 0.999 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297 | Bicine, MgCl2 |