8W1E
Crystal Structure of DPS-like protein PA4880 from Pseudomonas aeruginosa (dodecamer)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 216.178, 216.178, 278.505 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.860 - 2.900 |
R-factor | 0.1786 |
Rwork | 0.177 |
R-free | 0.19980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.886 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.510 | 2.950 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.191 | 1.790 |
Rmeas | 0.198 | 1.852 |
Rpim | 0.052 | 0.475 |
Total number of observations | 2082925 | 107710 |
Number of reflections | 145618 | 7128 |
<I/σ(I)> | 12.8 | 1.7 |
Completeness [%] | 100.0 | |
Redundancy | 14.3 | 15.1 |
CC(1/2) | 0.998 | 0.711 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | Salt Rx F9: 800 mM lithium sulfate, 100 mM Tris pH 8.5 |