8VS7
Crystal structure of ADI-19425 Fab in complex with anti-idiotypic 2C1 Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-27 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.802, 66.930, 130.191 |
Unit cell angles | 90.00, 103.74, 90.00 |
Refinement procedure
Resolution | 45.960 - 2.410 |
R-factor | 0.2025 |
Rwork | 0.200 |
R-free | 0.25440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.684 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 6.510 | 2.400 |
Rmerge | 0.223 | 0.139 | 0.822 |
Rmeas | 0.242 | 0.151 | 0.891 |
Rpim | 0.092 | 0.058 | 0.343 |
Total number of observations | 281056 | ||
Number of reflections | 42821 | 2253 | 2099 |
<I/σ(I)> | 6.1 | ||
Completeness [%] | 99.2 | 99.2 | 99 |
Redundancy | 6.6 | 6.5 | 6.4 |
CC(1/2) | 0.953 | 0.982 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M Imidazole pH 6.5, 12% PEG 3350, 30% MPD and 0.2M (NH4)2SO4 |