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8VS7

Crystal structure of ADI-19425 Fab in complex with anti-idiotypic 2C1 Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-27
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths66.802, 66.930, 130.191
Unit cell angles90.00, 103.74, 90.00
Refinement procedure
Resolution45.960 - 2.410
R-factor0.2025
Rwork0.200
R-free0.25440
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.684
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.2230.1390.822
Rmeas0.2420.1510.891
Rpim0.0920.0580.343
Total number of observations281056
Number of reflections4282122532099
<I/σ(I)>6.1
Completeness [%]99.299.299
Redundancy6.66.56.4
CC(1/2)0.9530.9820.844
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Imidazole pH 6.5, 12% PEG 3350, 30% MPD and 0.2M (NH4)2SO4

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PDB entries from 2025-05-28

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