8VQK
YcjN from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 |
Unit cell lengths | 63.216, 63.290, 74.314 |
Unit cell angles | 110.01, 91.09, 118.66 |
Refinement procedure
Resolution | 35.650 - 1.950 |
R-factor | 0.2177 |
Rwork | 0.215 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.805 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.400 | 2.060 |
High resolution limit [Å] | 1.950 | 1.950 |
Rpim | 0.088 | |
Number of reflections | 61761 | 6203 |
<I/σ(I)> | 3.9 | |
Completeness [%] | 91.4 | |
Redundancy | 3.9 | |
CC(1/2) | 0.293 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.01 M CdCl2, 0.2 M NH4SO4, 0.1 M HEPES pH 7.5, and 25 % PSM |