8VPV
Class III PreQ1 riboswitch mutant delta84
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 82.685, 82.685, 282.007 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.290 - 3.040 |
R-factor | 0.2527 |
Rwork | 0.248 |
R-free | 0.29970 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.001 |
RMSD bond angle | 0.333 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.290 | 3.310 |
High resolution limit [Å] | 3.040 | 3.040 |
Rmerge | 0.113 | 0.662 |
Rmeas | 0.124 | |
Rpim | 0.056 | 0.327 |
Number of reflections | 11152 | 1954 |
<I/σ(I)> | 8.9 | 1.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 9.1 | 9.1 |
CC(1/2) | 0.911 | 0.991 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 3.5 M Sodium Malonate |