Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VPM

Glutaminyl cyclase ApgG, rod shape

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2022-07-18
DetectorMAR scanner 300 mm plate
Wavelength(s)0.9787
Spacegroup nameP 64
Unit cell lengths123.947, 123.947, 46.076
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.340 - 2.150
R-factor0.2141
Rwork0.212
R-free0.24680
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.161
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.34042.3402.280
High resolution limit [Å]2.1506.3902.150
Rmerge0.0860.0560.730
Rmeas0.0940.0610.802
Number of reflections4288016366940
<I/σ(I)>12.39
Completeness [%]99.6
Redundancy11.3
CC(1/2)0.9970.9960.791
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298Bis-Tris (pH 6.5), PEG 10000, and 0.2 M Potassium sodium tartrate tetrahydrate

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon