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8VNN

Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 480s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2023-03-28
DetectorMAR scanner 300 mm plate
Wavelength(s)0.9765
Spacegroup nameP 31 2 1
Unit cell lengths114.060, 114.060, 88.020
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.070 - 1.790
R-factor0.1774
Rwork0.177
R-free0.19470
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.219
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.07043.0701.900
High resolution limit [Å]1.7905.3501.790
Rmerge0.1110.0580.998
Rmeas0.1230.0641.102
Number of reflections122888464319558
<I/σ(I)>9.58
Completeness [%]99.7
Redundancy11.1
CC(1/2)0.9970.9960.734
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62980.2 M Sodium Malonate, PEG 3350, 0.1 M MES

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