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8VN1

Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 160s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-31
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9765
Spacegroup nameP 31 2 1
Unit cell lengths113.880, 113.880, 88.220
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.840 - 1.790
R-factor0.1793
Rwork0.178
R-free0.19970
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.089
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.84047.8401.900
High resolution limit [Å]1.7905.3401.790
Rmerge0.0970.0370.712
Rmeas0.1080.0410.802
Number of reflections121128457919388
<I/σ(I)>11.99
Completeness [%]99.6
Redundancy9.9
CC(1/2)0.9980.9980.767
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62980.2 M Sodium Malonate, PEG 3350, 0.1 M MES

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PDB entries from 2024-07-31

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