8VMZ
Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 40s
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-03-31 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.9765 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 113.880, 113.880, 88.220 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 47.840 - 1.570 |
| R-factor | 0.1815 |
| Rwork | 0.181 |
| R-free | 0.19590 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.138 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.840 | 47.840 | 1.670 |
| High resolution limit [Å] | 1.570 | 4.690 | 1.570 |
| Rmerge | 0.062 | 0.026 | 0.753 |
| Rmeas | 0.069 | 0.028 | 0.841 |
| Number of reflections | 177988 | 6650 | 28481 |
| <I/σ(I)> | 16.33 | ||
| Completeness [%] | 99.7 | ||
| Redundancy | 10 | ||
| CC(1/2) | 0.999 | 0.999 | 0.758 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.2 M Sodium Malonate, PEG 3350, 0.1 M MES |






