8VMA
The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.993, 106.369, 142.819 |
Unit cell angles | 90.00, 99.23, 90.00 |
Refinement procedure
Resolution | 70.480 - 2.540 |
R-factor | 0.2067 |
Rwork | 0.205 |
R-free | 0.24450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.246 |
Data reduction software | RAPD |
Data scaling software | RAPD |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 140.970 | 2.620 |
High resolution limit [Å] | 2.540 | 2.540 |
Number of reflections | 51456 | 4415 |
<I/σ(I)> | 12.3 | |
Completeness [%] | 99.5 | |
Redundancy | 3.5 | |
CC(1/2) | 0.999 | 0.425 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 298 | 0.2 M sodium formate, 20% w/v polyethylene glycol 3350, pH 7.2, 3.0% w/v 1,5-diaminopentane dihydrochloride linker. |