8VH8
Crystal structure of heparosan synthase 2 from Pasteurella multocida at 2.85 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-22 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.979497 |
Spacegroup name | P 43 |
Unit cell lengths | 118.570, 118.570, 262.356 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.760 - 2.850 |
R-factor | 0.1987 |
Rwork | 0.198 |
R-free | 0.22280 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.838 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.760 | 2.954 |
High resolution limit [Å] | 2.850 | 2.852 |
Rmeas | 0.095 | 1.052 |
Rpim | 0.041 | 0.443 |
Number of reflections | 83838 | 8067 |
<I/σ(I)> | 9.67 | 1.15 |
Completeness [%] | 98.7 | |
Redundancy | 5.3 | |
CC(1/2) | 0.999 | 0.657 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Protein: 15mg/ml PmHS2(98-644) in 25mM Tris pH 7.5, 125mM NaCl, 5mM MnCl2, 5mM UDPGlcNAc, UDPGlcA well solution: .1M imidazole/MDES pH6.5, 60mM (MgCl2 and CaCl2) |