8VEX
Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 28
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-11-27 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97930 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 99.470, 136.350, 177.690 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.200 - 2.790 |
| R-factor | 0.22861 |
| Rwork | 0.226 |
| R-free | 0.26972 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.437 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.200 | 2.940 |
| High resolution limit [Å] | 2.790 | 2.790 |
| Rmerge | 0.087 | 0.763 |
| Rmeas | 0.095 | 0.829 |
| Rpim | 0.037 | 0.320 |
| Total number of observations | 28685 | |
| Number of reflections | 30399 | 4354 |
| <I/σ(I)> | 15.1 | 2.5 |
| Completeness [%] | 99.9 | |
| Redundancy | 6.6 | 6.6 |
| CC(1/2) | 0.999 | 0.945 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6 | 291 | 10% PEG 4000, 0.2M magnesium chloride, 0.1M sodium citrate (pH 6.0) |
