8UZN
Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (AMP bound)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-09 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 83.883, 100.503, 123.717 |
Unit cell angles | 90.00, 95.87, 90.00 |
Refinement procedure
Resolution | 123.070 - 2.150 |
R-factor | 0.187 |
Rwork | 0.186 |
R-free | 0.21450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.783 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 123.070 | 2.210 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.079 | 0.810 |
Rmeas | 0.091 | 0.925 |
Rpim | 0.045 | 0.443 |
Total number of observations | 435688 | 33712 |
Number of reflections | 109052 | 8000 |
<I/σ(I)> | 9.8 | 2 |
Completeness [%] | 98.4 | |
Redundancy | 4 | 4.2 |
CC(1/2) | 0.997 | 0.748 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | JCSG+ G8: 20% PEG 3350, 0.15 M DL-malic acid, KlaeA.00020.b.B1.PW39167 at 17 mg/mL. Plate: 13677, well G8 drop 1. Overnight soak with 10mM AMP in crystallant. Puck: PSL-0503, Cryo: 30% PEG3350 + 70% crystallant |