8UZ7
Crystal structure of a novel triose phosphate isomerase identified on the shrimp transcriptome
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-05-25 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.181 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.564, 84.253, 73.739 |
Unit cell angles | 90.00, 92.69, 90.00 |
Refinement procedure
Resolution | 55.450 - 1.700 |
R-factor | 0.189 |
Rwork | 0.189 |
R-free | 0.19090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.831 |
Data reduction software | HKL-2000 |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.450 | 1.763 |
High resolution limit [Å] | 1.700 | 1.702 |
Rmerge | 0.080 | 0.821 |
Rmeas | 0.090 | 0.936 |
Rpim | 0.446 | |
Number of reflections | 91724 | 9794 |
<I/σ(I)> | 13.73 | 2.22 |
Completeness [%] | 93.1 | |
Redundancy | 6.1 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | Index kit (Hampton Research) No. 83 (0.2 M MgCl2-6H2O, 0.1 M Bis-Tris pH 6.5, 25% W/V PEG-3350, 20% PEG-400 as cryo-protectant) |