8UKR
RNA polymerase II elongation complex with Fapy-dG lesion soaking with ATP before chemistry
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.3 |
| Synchrotron site | ALS |
| Beamline | 5.0.3 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-04-27 |
| Detector | DECTRIS PILATUS3 2M |
| Wavelength(s) | 0.9765 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 159.617, 222.632, 190.697 |
| Unit cell angles | 90.00, 97.69, 90.00 |
Refinement procedure
| Resolution | 47.960 - 3.780 |
| R-factor | 0.2623 |
| Rwork | 0.261 |
| R-free | 0.30980 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.898 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.960 | 3.660 |
| High resolution limit [Å] | 3.590 | 3.590 |
| Rmerge | 0.574 | 4.892 |
| Rmeas | 0.620 | 2.161 |
| Rpim | 0.232 | 2.161 |
| Number of reflections | 76483 | 4424 |
| <I/σ(I)> | 4.5 | 0.4 |
| Completeness [%] | 99.4 | |
| Redundancy | 7 | |
| CC(1/2) | 0.985 | 0.464 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 390 mM ammonium phosphate (pH 6.0), 5 mM DTT, 5 mM dioxane, and 9-13% (w/v) PEG 6,000 |






