8UJX
Crystal structure of human polymerase eta with incoming dGMPnPP nucleotide opposite urea lesion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-11-30 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | P 61 |
Unit cell lengths | 98.929, 98.929, 81.568 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.840 - 2.170 |
R-factor | 0.1744 |
Rwork | 0.171 |
R-free | 0.22880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.927 |
Data reduction software | HKL-2000 (v721.2) |
Data scaling software | HKL-2000 (v721.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.210 |
High resolution limit [Å] | 2.170 | 2.170 |
Rpim | 0.050 | 0.400 |
Number of reflections | 24072 | 1202 |
<I/σ(I)> | 19.61 | 1.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 4.1 | 3.6 |
CC(1/2) | 0.992 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.1 M MES pH 5.5, 5mM magnesium chloride, 22% PEG MME 2000 |