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8UGM

FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, boronic acid-based compound Z27 bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-01
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9537
Spacegroup nameP 1 21 1
Unit cell lengths46.723, 73.971, 73.183
Unit cell angles90.00, 91.43, 90.00
Refinement procedure
Resolution39.820 - 1.650
R-factor0.1516
Rwork0.150
R-free0.18930
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.128
Data reduction softwareXDS (20220220)
Data scaling softwareAimless (0.7.8)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7101.680
High resolution limit [Å]1.6501.650
Rmerge0.1120.944
Rmeas0.1231.072
Rpim0.0500.494
Total number of observations35054511116
Number of reflections596872508
<I/σ(I)>9.41.7
Completeness [%]99.1
Redundancy5.94.4
CC(1/2)0.9960.536
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5289.1520uL 25.0 mg/mL FphE (10mM HEPES pH 7.5, 100mM NaCl) were mixed with 3uL Z27 (50mM in DMSO) and incubated at 4C overnight. 0.3 uL FphE-Z27 solution was mixed with 0.15 uL of reservoir solution. Sitting drop reservoir contained 25 uL of 180mM Calcium acetate, 100mM MES pH 6.5, 22.5% PEG 2000 MME. Crystal appeared within 2.5 days at 16C and grew until 14.5 days when it was frozen in a solution of ~25% glycerol, 75% reservoir.

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