8UFO
Crystal Structure of Gastrointestinal HAstV VA1 capsid spike domain at 1.46 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 109.616, 82.559, 61.120 |
Unit cell angles | 90.00, 102.71, 90.00 |
Refinement procedure
Resolution | 41.280 - 1.460 |
R-factor | 0.1533 |
Rwork | 0.153 |
R-free | 0.17710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.037 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.350 | 1.490 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.150 | |
Number of reflections | 91234 | 9043 |
<I/σ(I)> | 18.7 | |
Completeness [%] | 100.0 | |
Redundancy | 6.4 | |
CC(1/2) | 0.999 | 0.981 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 0.2 M MgCl2, 0.1 M Tris-HCl pH 8.5, and 25% PEG3350 |