8UEI
Crystal structure of SARS-CoV-2 3CL protease with inhibitor 28
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-08-04 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.055, 83.204, 54.685 |
Unit cell angles | 90.00, 117.50, 90.00 |
Refinement procedure
Resolution | 27.160 - 1.710 |
R-factor | 0.1648 |
Rwork | 0.162 |
R-free | 0.19160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8udf |
RMSD bond length | 0.006 |
RMSD bond angle | 0.836 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.160 | 1.750 |
High resolution limit [Å] | 1.710 | 1.710 |
Rmerge | 0.086 | 0.714 |
Number of reflections | 41110 | 2894 |
<I/σ(I)> | 13.8 | 2.6 |
Completeness [%] | 98.4 | 94.6 |
Redundancy | 3.6 | 7.1 |
CC(1/2) | 0.998 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 277 | 100 mM MES, 20% w/v PEG4000, 100 mM sodium phosphate monobasic |