8UEF
Crystal structure of SARS-CoV-2 3CL protease with inhibitor 32
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-10 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.740, 81.280, 54.635 |
Unit cell angles | 90.00, 116.97, 90.00 |
Refinement procedure
Resolution | 43.530 - 1.960 |
R-factor | 0.1695 |
Rwork | 0.166 |
R-free | 0.20410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8udf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.806 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.143 | 1.651 |
High resolution limit [Å] | 1.440 | 1.440 |
Rmerge | 0.067 | 0.840 |
Number of reflections | 37685 | 1885 |
<I/σ(I)> | 10.5 | 1.6 |
Completeness [%] | 92.8 | 67.3 |
Redundancy | 5.4 | |
CC(1/2) | 0.999 | 0.653 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5 | 277 | 100 mM sodium acetate, 20% w/v PEG8000, 100 mM potassium thiocyanate |