8UEA
Crystal structure of SARS-CoV-2 3CL protease with inhibitor 29
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-27 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 95.740, 81.952, 54.472 |
Unit cell angles | 90.00, 116.99, 90.00 |
Refinement procedure
Resolution | 32.790 - 1.940 |
R-factor | 0.1727 |
Rwork | 0.169 |
R-free | 0.20450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8udf |
RMSD bond length | 0.006 |
RMSD bond angle | 0.798 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.102 | 1.679 |
High resolution limit [Å] | 1.522 | 1.522 |
Rmerge | 0.070 | 1.097 |
Number of reflections | 37181 | 1859 |
<I/σ(I)> | 12.2 | 1.5 |
Completeness [%] | 93.1 | 71.9 |
Redundancy | 7 | 6.9 |
CC(1/2) | 0.999 | 0.674 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 277 | 100 mM MES, 20% w/v PEG4000, 100 mM sodium phosphate monobasic |