8UE0
Crystal structure of SARS-CoV-2 3CL protease with inhibitor 47
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 98.309, 82.011, 52.202 |
Unit cell angles | 90.00, 115.61, 90.00 |
Refinement procedure
Resolution | 32.710 - 2.160 |
R-factor | 0.1661 |
Rwork | 0.161 |
R-free | 0.21330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8udf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.848 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.201 | 1.919 |
High resolution limit [Å] | 1.785 | 1.785 |
Rmerge | 0.062 | 1.193 |
Number of reflections | 35216 | 1382 |
<I/σ(I)> | 11.5 | 1.4 |
Completeness [%] | 99.6 | 48.7 |
Redundancy | 6.3 | |
CC(1/2) | 0.999 | 0.504 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5 | 277 | 100 mM sodium acetate, 20% w/v PEG8000, 100 mM potassium thiocyanate |