8UCH
Thermophilic RNA Ligase from Palaeococcus pacificus K92A + ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953659 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.020, 97.251, 140.101 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.720 - 2.140 |
R-factor | 0.1721 |
Rwork | 0.170 |
R-free | 0.20460 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.785 |
Data reduction software | Zanuda (v7.1) |
Data scaling software | XDS (v7.1) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.720 | 46.720 |
High resolution limit [Å] | 2.140 | 2.217 |
Rmerge | 0.109 | 0.968 |
Number of reflections | 31266 | 3098 |
<I/σ(I)> | 16.75 | 2.55 |
Completeness [%] | 100.0 | |
Redundancy | 13.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291.15 | 80 mM strontium chloride hexahydrate, 20 mM magnesium chloride hexahydrate, 40 mM sodium cacodylate trihydrate pH 7.0, 20% v/v (+/-)-2-methyl-2,4-pentanediol, 12 mM spermine tetrahydrochloride |