Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8UCG

Thermophilic RNA Ligase from Palaeococcus pacificus K92A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.953725
Spacegroup nameP 2 21 21
Unit cell lengths80.793, 99.699, 142.477
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.880 - 1.860
R-factor0.2087
Rwork0.207
R-free0.23520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.814
Data reduction softwareZanuda (v.7.1)
Data scaling softwareXDS (v.7.1)
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.8801.926
High resolution limit [Å]1.8601.860
Rmerge0.0740.849
Number of reflections970929589
<I/σ(I)>17.65
Completeness [%]99.999.89
Redundancy13.814.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5291.1580 mM strontium chloride hexahydrate, 20 mM magnesium chloride hexahydrate, 40 mM sodium cacodylate trihydrate pH 6.5, 20% v/v (+/-)-2-methyl-2,4-pentanediol, 12 mM spermine tetrahydrochloride

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon