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8UC6

Calpain-7:IST1 Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-27
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.19499
Spacegroup nameP 65 2 2
Unit cell lengths87.841, 87.841, 183.894
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.631 - 2.701
R-factor0.2184
Rwork0.211
R-free0.28470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2kw3
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwarePHENIX (1.16)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.63139.6302.830
High resolution limit [Å]2.7008.9602.700
Rmerge0.8550.1446.810
Rmeas0.8590.1456.843
Rpim0.0800.0150.666
Total number of observations38774164526
Number of reflections122284171581
<I/σ(I)>1139.61.5
Completeness [%]100.099.199.9
Redundancy114.393104.1
CC(1/2)0.9980.9990.650
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.2294Both proteins were purified and concentrated to 20 mg/ml in buffer containing 25 mM Tris, pH 7.2, 150 mM NaCl, 1 mM TCEP, 0.5 mM EDTA. The proteins were mixed in a 1:2 molar ratio (CAPN7:IST1). Crystals grew at 21 C (294 K) in Rigaku Wizard Cryo condition D5 (25% (v/v) 1,2-Porpanediol, 100 mM Sodium phosphate dibasic/Citric acid pH 4.2, 5% (w/v) PEG 3000, 10% (v/v) Glycerol. Crystals were transferred briefly to crystallization buffer supplemented with 25% added glycerol prior to plunging in liquid nitrogen

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