8UBS
Crystal structure of NrdJ-1 split intein fusion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-05 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97242 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.793, 84.383, 174.709 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.120 - 1.950 |
R-factor | 0.1822 |
Rwork | 0.180 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.801 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.120 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.128 | 0.844 |
Rmeas | 0.139 | 0.916 |
Rpim | 0.053 | 0.352 |
Number of reflections | 53184 | 3754 |
<I/σ(I)> | 10.3 | 2.2 |
Completeness [%] | 99.8 | 98.1 |
Redundancy | 6.8 | 6.6 |
CC(1/2) | 0.997 | 0.808 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | 4.5 M sodium formate |