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8U6N

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 3-(2-((6-cyanonaphthalen-1-yl)oxy)phenoxy)-N,N-dimethylpropanamide (JLJ752), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-28
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameC 1 2 1
Unit cell lengths209.572, 65.651, 100.573
Unit cell angles90.00, 114.67, 90.00
Refinement procedure
Resolution36.450 - 2.740
R-factor0.255
Rwork0.253
R-free0.29100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.065
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]91.3922.782
High resolution limit [Å]2.7352.735
Rmerge0.0801.971
Rmeas0.0972.354
Rpim0.0370.906
Number of reflections331241630
<I/σ(I)>11.2
Completeness [%]99.8100
Redundancy6.2
CC(1/2)0.9980.344
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27750 mM Tris pH 7.5, 15% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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PDB entries from 2024-07-31

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