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8U5R

Structure of Mango II variant aptamer bound to T01-6A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.000
Spacegroup nameC 2 2 21
Unit cell lengths36.929, 180.748, 106.248
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.800 - 2.600
R-factor0.2054
Rwork0.200
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.001
RMSD bond angle0.364
Data reduction softwareDIALS (3.8)
Data scaling softwareDIALS (3.8)
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.8002.693
High resolution limit [Å]2.6002.600
Number of reflections114141114
<I/σ(I)>16.83
Completeness [%]99.7
Redundancy12.3
CC(1/2)0.9990.823
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP294Magnesium chloride hexahydrate, MOPS, Tacsimate, hexamine cobalt (III) chloride, and 1-propanol

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PDB entries from 2024-07-10

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