Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8U5M

Structure of Sts-1 HP domain with rebamipide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-17
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)0.979
Spacegroup nameP 1 21 1
Unit cell lengths82.650, 122.274, 99.588
Unit cell angles90.00, 112.41, 90.00
Refinement procedure
Resolution73.550 - 2.460
R-factor0.23119
Rwork0.229
R-free0.27448
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vr6
RMSD bond length0.002
RMSD bond angle1.209
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]122.2702.520
High resolution limit [Å]2.4602.460
Rmerge0.0830.824
Rmeas0.1031.019
Rpim0.0600.591
Total number of observations17879812714
Number of reflections652484601
<I/σ(I)>101.3
Completeness [%]98.3
Redundancy2.72.8
CC(1/2)0.9960.483
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72910.1 Hepes 10% ethylene glycol 0.3 M magnesium chloride 20% PEG 8000

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon