Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8U55

Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-08
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.127134
Spacegroup nameP 43 21 2
Unit cell lengths62.227, 62.227, 372.317
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.000 - 1.900
R-factor0.2285
Rwork0.226
R-free0.27370
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.996
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.2_4158))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]74.4601.940
High resolution limit [Å]1.9001.900
Rmerge0.3380.326
Rmeas0.34512.141
Rpim0.0692.358
Number of reflections1097673772
<I/σ(I)>9.7
Completeness [%]100.0
Redundancy2526.3
CC(1/2)0.9840.587
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.150.18 M CaCl2, 0.09 M HEPES pH 8.0, 31.5% (v/v) Pentaerythritol ethoxylate (15/4 EO/OH), 0.59 mM Undecyl-beta-D-maltoside

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon