8U55
Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-08 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.127134 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 62.227, 62.227, 372.317 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.000 - 1.900 |
R-factor | 0.2285 |
Rwork | 0.226 |
R-free | 0.27370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.996 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.2_4158)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.460 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.338 | 0.326 |
Rmeas | 0.345 | 12.141 |
Rpim | 0.069 | 2.358 |
Number of reflections | 109767 | 3772 |
<I/σ(I)> | 9.7 | |
Completeness [%] | 100.0 | |
Redundancy | 25 | 26.3 |
CC(1/2) | 0.984 | 0.587 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.18 M CaCl2, 0.09 M HEPES pH 8.0, 31.5% (v/v) Pentaerythritol ethoxylate (15/4 EO/OH), 0.59 mM Undecyl-beta-D-maltoside |