8U0G
Full-length dimer of DNA-Damage Response Protein C from Deinococcus radiodurans - Crystal form xMJ7124
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-09-23 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.541780 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 111.039, 111.039, 101.493 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 69.810 - 4.280 |
R-factor | 0.2567 |
Rwork | 0.252 |
R-free | 0.34570 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.978 |
Data reduction software | XDS (20220220) |
Data scaling software | pointless (0.7.7) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 96.163 | 4.351 |
High resolution limit [Å] | 4.277 | 4.277 |
Rmerge | 0.179 | 0.937 |
Rpim | 0.064 | 0.344 |
Number of reflections | 5236 | 242 |
<I/σ(I)> | 9.9 | 2.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.9 | 9.1 |
CC(1/2) | 0.998 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.5 ul of protein solution was mixed with 1.5 uL of crystallization solution and hung upside-down in a sealed chamber containing 1mL of well solution Protein solution: 140uM DdrC, 200mM Sodium sulfate, 1mM Magnesium chloride, 20mM Sodium citrate / Citric acid, pH 6.5 Crystallization solution (Wizard Classics 1 #22) 10% (v/v) 2-propanol 100mM Tris-base/HCl, pH 8.5 Well solution: 1.5M Ammonium sulfate |