Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TYZ

Structure of a bacterial E1-E2-Ubl complex (form 2)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-07
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 42 21 2
Unit cell lengths199.925, 199.925, 66.880
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution70.680 - 2.680
R-factor0.2093
Rwork0.207
R-free0.24460
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.007
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]199.9302.800
High resolution limit [Å]2.6802.680
Rmerge0.1013.776
Number of reflections387274641
<I/σ(I)>19.20.7
Completeness [%]100.0
Redundancy13.7
CC(1/2)1.0000.485
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298100 mM imidazole pH 8.0, 200 mM MgCl2, and 10% PEG 3350

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon