8TY3
MI-31 ligand bound to SARS-CoV-2 Mpro
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-002 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2021-04-26 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.5430 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 51.532, 80.228, 89.337 |
Unit cell angles | 90.00, 96.50, 90.00 |
Refinement procedure
Resolution | 24.450 - 1.850 |
R-factor | 0.2112 |
Rwork | 0.210 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.196 |
Data reduction software | PROTEUM PLUS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.450 | 1.916 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.032 | 0.390 |
Rmeas | 0.045 | 0.551 |
Rpim | 0.032 | 0.390 |
Number of reflections | 30875 | 3102 |
<I/σ(I)> | 13.69 | 2.55 |
Completeness [%] | 96.9 | 99.48 |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.816 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH 8.0 |