8TQX
Crystal structure of the Zika virus stem-loop A (SLA) bottom stem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-03-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.99 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 28.322, 41.947, 97.659 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.830 - 2.090 |
R-factor | 0.2525 |
Rwork | 0.249 |
R-free | 0.27840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.042 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.076 | |
Rmeas | 0.080 | |
Rpim | 0.022 | 0.484 |
Number of reflections | 7321 | 314 |
<I/σ(I)> | 23.22 | 1.42 |
Completeness [%] | 94.4 | 83.3 |
Redundancy | 10.7 | 6.7 |
CC(1/2) | 0.989 | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | Bis-Tris propane, magnesium chloride (MgCl2), and polyethylene glycol (PEG) 3350 |