8TLK
CDCA7 (Human) Binds Non-B-form 32-mer DNA oligo Containing a 5mC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.99999 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 173.479, 31.538, 94.566 |
Unit cell angles | 90.00, 110.18, 90.00 |
Refinement procedure
Resolution | 43.060 - 2.990 |
R-factor | 0.2454 |
Rwork | 0.243 |
R-free | 0.30180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.487 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.060 | 3.090 |
High resolution limit [Å] | 2.990 | 2.990 |
Rmerge | 0.123 | 0.449 |
Rpim | 0.070 | 0.333 |
Number of reflections | 8135 | 772 |
<I/σ(I)> | 6.1 | 1.7 |
Completeness [%] | 79.7 | 75.8 |
Redundancy | 3.6 | 2.3 |
CC(1/2) | 1.000 | 0.777 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.2M MgCl2, 0.1 M Bis-Tris pH6.0, 25%PEG3350 |