8TKM
Murine NF-kappaB p50 Rel Homology Region homodimer in complex with 17-mer kappaB DNA from human interleukin-6 (IL-6) promoter
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-14 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1 |
Spacegroup name | P 65 |
Unit cell lengths | 162.172, 162.172, 60.384 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.430 - 2.800 |
R-factor | 0.2272 |
Rwork | 0.225 |
R-free | 0.27260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nfk |
RMSD bond length | 0.003 |
RMSD bond angle | 0.616 |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.430 | 2.920 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 22616 | 2260 |
<I/σ(I)> | 17.9 | 2 |
Completeness [%] | 99.9 | |
Redundancy | 17.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M Na-Acetate pH 4.9, 16% (w/v) PEG 1500 |