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8TDZ

16mer self-complementary duplex RNA with D:U pair sequence 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 2.0.1
Synchrotron siteALS
Beamline2.0.1
Temperature [K]99
Detector technologyPIXEL
Collection date2023-04-22
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.038413
Spacegroup nameH 3 2
Unit cell lengths41.870, 41.870, 124.300
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.430 - 1.640
R-factor0.19
Rwork0.188
R-free0.22160
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.002
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0415)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.670
High resolution limit [Å]1.6401.640
Rmerge0.0530.184
Rmeas0.0570.204
Rpim0.0190.084
Number of reflections5403250
<I/σ(I)>35.58.4
Completeness [%]99.6100
Redundancy8.75
CC(1/2)0.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529340 mM Lithium chloride, 20 mM Magnesium chloride hexahydrate, 40 mM Sodium cacodylate trihydrate pH 5.5, 30% v/v (+/-)-2-Methyl-2,4-pentanediol, 2 mM Hexammine cobalt(III) chloride

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