8T9Q
Crystal structure of fused YR, an asymmetric 4-OT trimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 |
Unit cell lengths | 49.090, 49.409, 49.324 |
Unit cell angles | 102.36, 102.16, 102.11 |
Refinement procedure
Resolution | 46.510 - 2.290 |
R-factor | 0.27274 |
Rwork | 0.269 |
R-free | 0.30333 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.573 |
Data reduction software | HKL-2000 (v723) |
Data scaling software | HKL-2000 (v723) |
Phasing software | REFMAC (5.8.0267) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.290 | 6.240 | 2.300 |
Rmerge | 0.040 | 0.274 | |
Rmeas | 0.054 | 0.376 | |
Rpim | 0.037 | 0.256 | |
Number of reflections | 18084 | 902 | 929 |
<I/σ(I)> | 8 | ||
Completeness [%] | 96.0 | 96.4 | 96.2 |
Redundancy | 2 | 2 | 2 |
CC(1/2) | 0.993 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | fYR-4OT was crystallized in 1.5-2M (NH4)2SO4, 0.1M HEPES buffer (pH 7.2-8.0), and 2% PEG 400 |