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8T9P

Crystal Structure of YR, a heterohexamer of the 4-oxalocrotonate tautomerase (4-OT) family

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-01
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths110.194, 61.028, 92.141
Unit cell angles90.00, 123.82, 90.00
Refinement procedure
Resolution26.840 - 2.040
R-factor0.1946
Rwork0.192
R-free0.23020
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.995
Data reduction softwareHKL-2000 (v723)
Data scaling softwareHKL-2000 (v723)
Phasing softwarePHENIX (1.18.2_3874)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.090
High resolution limit [Å]2.0405.5602.050
Rmerge0.0490.508
Rmeas0.0570.600
Rpim0.0290.314
Number of reflections3245816811592
<I/σ(I)>8
Completeness [%]99.899.399.7
Redundancy3.63.63.4
CC(1/2)0.9970.791
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277The hhYR-4OT was crystallized in 54-64% 2-methyl-2,4-pentanediol (MPD), 0.1M sodium cacodylate pH 6.8, and 5% polyethylene glycol (PEG) 8000

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