Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8T8T

Crystal structure of TET25 in complex with PyDH2 ligand in P212121 space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]183
Detector technologyPIXEL
Collection date2023-02-24
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9791
Spacegroup nameP 21 21 21
Unit cell lengths29.624, 51.923, 88.064
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.960 - 1.620
R-factor0.2081
Rwork0.207
R-free0.22790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.311
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.9601.650
High resolution limit [Å]1.6201.620
Rmerge0.103
Number of reflections8871343
<I/σ(I)>8.80.8
Completeness [%]98.473.3
Redundancy12.812.6
CC(1/2)0.9990.530
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52950.05 M KCl, 0.1 M LiCl, 0.012 M spermine tetrahydrochloride, 0.05 M MES pH 6.5, 25% v/v PEG 400

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon