Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8T7J

Oxygen- and PLP-dependent Cap15 holoenzyme bound with phosphate anion

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameC 2 2 21
Unit cell lengths142.590, 220.986, 96.735
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.900 - 2.400
R-factor0.2257
Rwork0.224
R-free0.26770
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.482
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.9002.460
High resolution limit [Å]2.4002.400
Rmerge0.0901.501
Rmeas0.0931.562
Rpim0.0250.462
Number of reflections600314126
<I/σ(I)>19.31.8
Completeness [%]99.599.38
Redundancy13.513
CC(1/2)1.0000.881
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82930.2 M sodium acetate, 17 % polyethylene glycol 3350, 10-15 mg/mL Cap15

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon