8T5T
Crystal structure of outer membrane lipoprotein carrier protein (LolA) from Borrelia burgdorferi (steric acid bound)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-05 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 122.291, 122.291, 122.291 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.820 - 1.800 |
R-factor | 0.1982 |
Rwork | 0.196 |
R-free | 0.23620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.151 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.21rc1_4933: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.930 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.077 | 2.755 |
Rmeas | 0.078 | 2.791 |
Rpim | 0.012 | 0.443 |
Total number of observations | 1157377 | 67350 |
Number of reflections | 29577 | 1709 |
<I/σ(I)> | 30.1 | 1.7 |
Completeness [%] | 100.0 | |
Redundancy | 39.1 | 39.4 |
CC(1/2) | 1.000 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | Berkeley E4: 1500 mM Ammonium sulfate, 100 mM Hepes pH 7.5. BobuA.17454.a.DH3.PK00001 at 10 mg/mL. plate 13170, well E4 drop 3. Puck: PSL-1107, Cryo: 2.5M lithium sulfate, Large mass of electron density in the binding pocket that appeared to be a fatty acid from the expression host. Modelled as steric acid |